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[EP-tech] DataCite Doi Plugin



Great, now I'm trying on two docs:

http://www.fedoa.unina.it/89/

and

http://www.fedoa.unina.it/1125/

In the first case the DOI is coined and minted.

The second one fails:
[xml] xml error: Invalid byte 2 of 3-byte UTF-8 sequence.

That's probably beacause the filed title contains an accented letter:

<title>Regis servitium nostra mercatura: culture e linguaggi della
fiscalit? nella Napoli aragonese</title>

I suppose that we need to force the field contents to utf-8 before sending
it to datacite, don't you?

Thanks,
Alfredo







2017-06-22 17:33 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:

> Yes only metadata.
>
> I just changed the code to mint the doi too.
>
> May you change the the code in cfg/plugins/EPrints/Plugin/Event/DataCiteEvent.pm
>
>
> in "sub datacite_request" before "return $res->code();" add this 2 line to
> debug better
>
> print STDERR $req->as_string;
>
> print STDERR $res_as_string;
>
> and launch the bin script
>
> Il 22/06/2017 16:54, Alfredo Cosco ha scritto:
>
> Hello,
> i just changed the api link to the test one:
>
> https://mds.test.datacite.org/metadata
>
> This test script works.
>
> ---> HTTP/1.1 201 Created
>
> If I log in to datacite test env (https://mds.test.datacite.org) I see
> the new record, created but not minted, the only message I can see with
> something like a debug is a laconic:  [Not minted because] "not
> registered in DOI system"
>
> Thank you,
> A.
>
>
>
> 2017-06-22 15:11 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>
>> You can see the full test script at https://gist.github.com/enioca
>> rboni/046a4d1231eb726f22716e5300dace41
>>
>> Il 22/06/2017 14:51, Enio Carboni ha scritto:
>>
>> Hi Alfredo,
>>
>>  May you test this perl script to register your metadata (It's a plugin
>> code extract)
>>
>> Replace <YOUR_USER> e <YOUR_PASS> with your real user/pass
>>
>> I successfully tested the script (exit: HTTP/1.1 201 Created)
>>
>> Il 22/06/2017 11:32, Alfredo Cosco ha scritto:
>>
>> The  number  "is special test prefix 10.5072 available to all
>> datacentres." (see https://mds.datacite.org/static/apidoc#tocAnchor-9 )
>>
>> There are some test records registered by a the previous admin, probably
>> by hand, and they are handled:
>> https://handle.test.datacite.org/10.5072/UNINA/FEDOA/1910?noredirect=on
>>
>> I also supposed that the slash in repoid was wrong, so i canghed
>> with: UNINA-FEDOA
>>
>> But the result is the same.
>> Thanks,
>> Alfredo
>>
>>
>>
>> 2017-06-21 14:37 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>>
>>> Well, the export is ok, so now:
>>>
>>>  are you sure your doi prefix?
>>>
>>> On DataCite APIs i see for metadata "Response code" (
>>> https://mds.datacite.org/static/apidoc#tocAnchor-18 ) :
>>>
>>> Response statuses
>>>
>>> 201 Created - operation successful
>>>
>>> *400 Bad Request** - invalid XML, wrong prefi*x
>>>
>>> 401 Unauthorized - no login
>>>
>>> 403 Forbidden - login problem, quota exceeded
>>>
>>> 500 Internal Server Error - server internal error, try later and if
>>> problem persists please contact us
>>>
>>> So i check your prefix and i don't found none, you can see at
>>> https://search.datacite.org/api :
>>> Es:
>>>
>>>    - https://search.datacite.org/api?q=prefix:10.5072 or
>>>    - https://search.datacite.org/api?q=UNINA%20and%20FEDOA
>>>
>>>
>>>
>>> Il 21/06/2017 12:43, Alfredo Cosco ha scritto:
>>>
>>> <resource xmlns="http://datacite.org/schema/kernel-2.2"; xmlns:xsi="
>>> http://www.w3.org/2001/XMLSchema-instance"; xsi:schemaLocation="
>>> http://datacite.org/schema/kernel-2.2 http://schema.datacite.org/met
>>> a/kernel-2.2/metadata.xsd">
>>> <identifier identifierType="DOI">10.5072/UNINA/FEDOA/89</identifier>
>>> <creators>
>>> <creator>
>>> <creatorName>Delle Donne, Roberto</creatorName>
>>> </creator>
>>> </creators>
>>> <titles>
>>> <title>
>>> Autopubblicazione e pubblicazione coordinata di testi storici in formato
>>> digitale
>>> </title>
>>> </titles>
>>> <publisher>UNINA/FEDOA</publisher>
>>> <publicationYear>2006</publicationYear>
>>> <resourceType resourceTypeGeneral="Text">BookSection</resourceType>
>>> <alternateIdentifiers>
>>> <alternateIdentifier alternateIdentifierType="URL">http://ww
>>> w.fedoa.unina.it/89/</alternateIdentifier>
>>> </alternateIdentifiers>
>>> </resource>
>>>
>>> 2017-06-21 12:11 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>>>
>>>> Can you check the output of DataCiteXML export plugin on some of your
>>>> eprintid?
>>>>
>>>> You can use url like this:
>>>>
>>>> <YOUR_EPRINT_BASE_URL>/cgi/export/eprint/<EPRINT_ID>/DataCit
>>>> eXML/datacite.xml
>>>>
>>>> The plugin use this export to register metadata first then if all ok
>>>> coin doi
>>>>
>>>> Il 21/06/2017 11:39, Alfredo Cosco ha scritto:
>>>>
>>>> Hello,
>>>> also using production credentials and api url the error is the same.
>>>>
>>>> Thank you,
>>>> Alfredo
>>>>
>>>> 2017-06-21 10:24 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>>>>
>>>>> By reviewing the DataCite APIs on https://mds.datacite.org/stati
>>>>> c/apidoc I no longer see any mention on their test site (
>>>>> https://mds.test.datacite.org/) while I see an addition of the
>>>>> parameter "testMode=true" directly in the POST url for test purposes.
>>>>>
>>>>> Could you try it directly with the DataCite production url (
>>>>> https://mds.datacite.org/)?
>>>>>
>>>>>
>>>>> I will update the code as soon as possible to reflect the "testMode"
>>>>> parameter if the rest is still valid
>>>>>
>>>>> Il 21/06/2017 00:39, Alfredo Cosco ha scritto:
>>>>>
>>>>> I used the default string:
>>>>>
>>>>> $c->{datacitedoi}{apiurl} = "https://mds.test.datacite.org/";;
>>>>>
>>>>> 2017-06-20 22:21 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>>>>>
>>>>>> What value did you put in "$c->{datacitedoi}{apiurl}" in cfg/cgf.d/
>>>>>> z_datacitedoi.pl?
>>>>>>
>>>>>> This URL should end with a '/' otherwise the url for the coin
>>>>>> unfortunately is not done well.
>>>>>>
>>>>>>  Let me know if there are any news
>>>>>>   Enio
>>>>>>
>>>>>> Il 20/06/2017 19:48, Alfredo Cosco ha scritto:
>>>>>>
>>>>>> Hi All, hi Enio,
>>>>>> I installed your plugin and I'm trying to launch the bin script to
>>>>>> test it.
>>>>>> I get this error message from the script:
>>>>>>
>>>>>> Connecting to DB ... done.
>>>>>> [doi=10.5072/UNINA.FEDOA/1125] Metadata registration response from
>>>>>> datacite api: response_code=400
>>>>>> [doi=10.5072/UNINA.FEDOA/1125] rescheduling event
>>>>>> Error HTTP_LOCKED while trying to coin doi for eprint 1125
>>>>>> Ending EPrints Repository.
>>>>>>
>>>>>> Thanks,
>>>>>> Alfredo
>>>>>>
>>>>>> 2017-06-16 17:09 GMT+02:00 Enio Carboni <enio.carboni at gmail.com>:
>>>>>>
>>>>>>> I use my own version last year forked from eprints/datasite but with
>>>>>>> the news of the fork in eprintsug
>>>>>>>
>>>>>>> You may try at https://github.com/eniocarboni/datacite where i also
>>>>>>> add a manual script to coin in bin/datacitecoin so we can test better.
>>>>>>>
>>>>>>> As I wrote the last edit is November 2016 so I hope the plugin can
>>>>>>> still be fine
>>>>>>>
>>>>>>>   Enio Carboni
>>>>>>>
>>>>>>> Il 16/06/2017 16:36, Alfredo Cosco ha scritto:
>>>>>>>
>>>>>>> Hello,
>>>>>>> no, I didn't receive any suggestion.
>>>>>>> But now at least I can read an error log.
>>>>>>> So, I verified my plugin and is in sync with github repo.
>>>>>>>
>>>>>>> I verified all connection parameters and set up the script to make
>>>>>>> tests on datacite:
>>>>>>> $c->{datacitedoi}{prefix} = "10.5072";
>>>>>>> $c->{datacitedoi}{apiurl} = "https://mds.test.datacite.org";;
>>>>>>>
>>>>>>> then I restarted the indexer.
>>>>>>>
>>>>>>> Now when I try to coin a DOI the indexer.log add this message
>>>>>>>
>>>>>>> [urn:uuid:86176f74-3e5f-466c-8680-94b13876b8ff]
>>>>>>> Event::DataCiteEvent::datacite_doi: Error during execution:
>>>>>>> XML::LibXML::Node::appendChild() -- nNode is not a blessed SV
>>>>>>> reference at /usr/share/eprints3/archives/s
>>>>>>> ire/cfg/plugins/EPrints/Plugin/Export/DataCiteXML.pm line 73.
>>>>>>>
>>>>>>> Thanks
>>>>>>> Alfedo
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 2017-06-13 22:43 GMT+02:00 Tomasz Neugebauer <
>>>>>>> Tomasz.Neugebauer at concordia.ca>:
>>>>>>>
>>>>>>>> I hope that Alfredo received some help from back in April, I didn?t
>>>>>>>> see it on the list.
>>>>>>>>
>>>>>>>> I found installing the DataCite plugin difficult as well. I got it
>>>>>>>> work eventually, but it was not trivial.
>>>>>>>>
>>>>>>>> I think that the Bazaar plugin is probably out of synch with all
>>>>>>>> the fixes that were applied in the last year or so to the github code.
>>>>>>>>
>>>>>>>> Here is a couple of points to remember when troubleshooting
>>>>>>>> DataCite plugin (something I was doing today):
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> 1)      The indexer does much of the work, so if you make a change
>>>>>>>> to the DataCite Event script, you have to restart the indexer before you
>>>>>>>> see a change.  Today, I had to make a change to accommodate this issue:
>>>>>>>> https://github.com/eprintsug/DataCiteDoi/issues/13 for example,
>>>>>>>> since I was minting a DOI for an item with a title in French.
>>>>>>>>
>>>>>>>> 2)      The error/logging for minting seems mostly to be stored
>>>>>>>> with the indexer.log in var folder.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks to David for flagging issue 13!  I spent half the day trying
>>>>>>>> to figure this one out before I found the issue post.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Tomasz
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> *From:* eprints-tech-bounces at ecs.soton.ac.uk [mailto:
>>>>>>>> eprints-tech-bounces at ecs.soton.ac.uk] *On Behalf Of *Alfredo Cosco
>>>>>>>> *Sent:* April-10-17 3:33 AM
>>>>>>>> *To:* eprints-tech at ecs.soton.ac.uk
>>>>>>>> *Subject:* [EP-tech] DataCite Doi Plugin
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Hi all,
>>>>>>>>
>>>>>>>> i'm trying to configure DataCite Doi plugin found on eprintsug
>>>>>>>> github page:
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> https://github.com/eprintsug/DataCiteDoi
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> The plugin seems correctly installed, the button to coin a DOI
>>>>>>>> appears but seems that it doesn't work.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I  set the plugin with the test API address:
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> https://mds.test.datacite.org
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> I set it with my datacite user and pw.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> But new DOIs do not appear in the list of generated DOI.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Please help me.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> Thanks,
>>>>>>>>
>>>>>>>> Alfredo
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
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>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
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>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
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>>>>>>
>>>>>>
>>>>>
>>>>>
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>>>>>
>>>>
>>>>
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>>
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