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[EP-tech] DataCite Doi Plugin



Yes only metadata.

I just changed the code to mint the doi too.

May you change the the code in
cfg/plugins/EPrints/Plugin/Event/DataCiteEvent.pm

in "sub datacite_request" before "return $res->code();" add this 2 line
to debug better

    print STDERR $req->as_string;

    print STDERR $res_as_string;

and launch the bin script


Il 22/06/2017 16:54, Alfredo Cosco ha scritto:
> Hello,
> i just changed the api link to the test one:
>
> https://mds.test.datacite.org/metadata
>  
> This test script works.
>
> ---> HTTP/1.1 201 Created
>
> If I log in to datacite test env (https://mds.test.datacite.org) I see
> the new record, created but not minted, the only message I can see
> with something like a debug is a laconic:  [Not minted because] "not
> registered in DOI system" 
>
> Thank you,
> A.
>
>
>
> 2017-06-22 15:11 GMT+02:00 Enio Carboni <enio.carboni at gmail.com
> <mailto:enio.carboni at gmail.com>>:
>
>     You can see the full test script at
>     https://gist.github.com/eniocarboni/046a4d1231eb726f22716e5300dace41
>     <https://gist.github.com/eniocarboni/046a4d1231eb726f22716e5300dace41>
>
>
>     Il 22/06/2017 14:51, Enio Carboni ha scritto:
>>
>>     Hi Alfredo,
>>
>>      May you test this perl script to register your metadata (It's a
>>     plugin code extract)
>>
>>     Replace <YOUR_USER> e <YOUR_PASS> with your real user/pass
>>
>>     I successfully tested the script (exit: HTTP/1.1 201 Created)
>>
>>
>>     Il 22/06/2017 11:32, Alfredo Cosco ha scritto:
>>>     The  number  "is special test prefix 10.5072 available to all
>>>     datacentres."
>>>     (see https://mds.datacite.org/static/apidoc#tocAnchor-9
>>>     <https://mds.datacite.org/static/apidoc#tocAnchor-9> )
>>>
>>>     There are some test records registered by a the previous admin,
>>>     probably by hand, and they are handled:
>>>     https://handle.test.datacite.org/10.5072/UNINA/FEDOA/1910?noredirect=on
>>>     <https://handle.test.datacite.org/10.5072/UNINA/FEDOA/1910?noredirect=on>
>>>
>>>     I also supposed that the slash in repoid was wrong, so i canghed
>>>     with: UNINA-FEDOA
>>>
>>>     But the result is the same.
>>>     Thanks,
>>>     Alfredo
>>>
>>>
>>>
>>>     2017-06-21 14:37 GMT+02:00 Enio Carboni <enio.carboni at gmail.com
>>>     <mailto:enio.carboni at gmail.com>>:
>>>
>>>         Well, the export is ok, so now:
>>>
>>>          are you sure your doi prefix?
>>>
>>>         On DataCite APIs i see for metadata "Response code" (
>>>         https://mds.datacite.org/static/apidoc#tocAnchor-18
>>>         <https://mds.datacite.org/static/apidoc#tocAnchor-18> ) :
>>>
>>>
>>>                     Response statuses
>>>
>>>             |201 Created|- operation successful
>>>
>>>             *|400 Bad Request|**- invalid XML, wrong prefi*x
>>>
>>>             |401 Unauthorized|- no login
>>>
>>>             |403 Forbidden|- login problem, quota exceeded
>>>
>>>             |500 Internal Server Error|- server internal error, try
>>>             later and if problem persists please contact us
>>>
>>>         So i check your prefix and i don't found none, you can see
>>>         at https://search.datacite.org/api
>>>         <https://search.datacite.org/api> :
>>>         Es:
>>>
>>>           * https://search.datacite.org/api?q=prefix:10.5072
>>>             <https://search.datacite.org/api?q=prefix:10.5072> or
>>>           * https://search.datacite.org/api?q=UNINA%20and%20FEDOA
>>>             <https://search.datacite.org/api?q=UNINA%20and%20FEDOA>
>>>
>>>
>>>
>>>         Il 21/06/2017 12:43, Alfredo Cosco ha scritto:
>>>>         <resource xmlns="http://datacite.org/schema/kernel-2.2
>>>>         <http://datacite.org/schema/kernel-2.2>" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance
>>>>         <http://www.w3.org/2001/XMLSchema-instance>" xsi:schemaLocation="http://datacite.org/schema/kernel-2.2
>>>>         <http://datacite.org/schema/kernel-2.2>
>>>>         http://schema.datacite.org/meta/kernel-2.2/metadata.xsd
>>>>         <http://schema.datacite.org/meta/kernel-2.2/metadata.xsd>">
>>>>         <identifier identifierType="DOI">10.5072/UNINA/FEDOA/89</identifier>
>>>>         <creators>
>>>>         <creator>
>>>>         <creatorName>Delle Donne, Roberto</creatorName>
>>>>         </creator>
>>>>         </creators>
>>>>         <titles>
>>>>         <title>
>>>>         Autopubblicazione e pubblicazione coordinata di testi
>>>>         storici in formato digitale
>>>>         </title>
>>>>         </titles>
>>>>         <publisher>UNINA/FEDOA</publisher>
>>>>         <publicationYear>2006</publicationYear>
>>>>         <resourceType resourceTypeGeneral="Text">BookSection</resourceType>
>>>>         <alternateIdentifiers>
>>>>         <alternateIdentifier alternateIdentifierType="URL">http://www.fedoa.unina.it/89/
>>>>         <http://www.fedoa.unina.it/89/></alternateIdentifier>
>>>>         </alternateIdentifiers>
>>>>         </resource>
>>>>
>>>>         2017-06-21 12:11 GMT+02:00 Enio Carboni
>>>>         <enio.carboni at gmail.com <mailto:enio.carboni at gmail.com>>:
>>>>
>>>>             Can you check the output of DataCiteXML export plugin
>>>>             on some of your eprintid?
>>>>
>>>>             You can use url like this:
>>>>
>>>>             <YOUR_EPRINT_BASE_URL>/cgi/export/eprint/<EPRINT_ID>/DataCiteXML/datacite.xml
>>>>
>>>>             The plugin use this export to register metadata first
>>>>             then if all ok coin doi
>>>>
>>>>
>>>>             Il 21/06/2017 11:39, Alfredo Cosco ha scritto:
>>>>>             Hello,
>>>>>             also using production credentials and api url the
>>>>>             error is the same.
>>>>>
>>>>>             Thank you,
>>>>>             Alfredo
>>>>>
>>>>>             2017-06-21 10:24 GMT+02:00 Enio Carboni
>>>>>             <enio.carboni at gmail.com <mailto:enio.carboni at gmail.com>>:
>>>>>
>>>>>                 By reviewing the DataCite APIs on
>>>>>                 https://mds.datacite.org/static/apidoc
>>>>>                 <https://mds.datacite.org/static/apidoc> I no
>>>>>                 longer see any mention on their test site
>>>>>                 (https://mds.test.datacite.org/
>>>>>                 <https://mds.test.datacite.org/>) while I see an
>>>>>                 addition of the parameter "testMode=true" directly
>>>>>                 in the POST url for test purposes.
>>>>>
>>>>>                 Could you try it directly with the DataCite
>>>>>                 production url (https://mds.datacite.org/)?
>>>>>
>>>>>
>>>>>                 I will update the code as soon as possible to
>>>>>                 reflect the "testMode" parameter if the rest is
>>>>>                 still valid
>>>>>
>>>>>
>>>>>                 Il 21/06/2017 00:39, Alfredo Cosco ha scritto:
>>>>>>                 I used the default string:
>>>>>>
>>>>>>                 $c->{datacitedoi}{apiurl} =
>>>>>>                 "https://mds.test.datacite.org/
>>>>>>                 <https://mds.test.datacite.org/>";
>>>>>>
>>>>>>                 2017-06-20 22:21 GMT+02:00 Enio Carboni
>>>>>>                 <enio.carboni at gmail.com
>>>>>>                 <mailto:enio.carboni at gmail.com>>:
>>>>>>
>>>>>>                     What value did you put in
>>>>>>                     "$c->{datacitedoi}{apiurl}" in
>>>>>>                     cfg/cgf.d/z_datacitedoi.pl
>>>>>>                     <http://z_datacitedoi.pl>?
>>>>>>
>>>>>>                     This URL should end with a '/' otherwise the
>>>>>>                     url for the coin unfortunately is not done well.
>>>>>>
>>>>>>                      Let me know if there are any news
>>>>>>                       Enio
>>>>>>
>>>>>>                     Il 20/06/2017 19:48, Alfredo Cosco ha scritto:
>>>>>>>                     Hi All, hi Enio,
>>>>>>>                     I installed your plugin and I'm trying to
>>>>>>>                     launch the bin script to test it.
>>>>>>>                     I get this error message from the script:
>>>>>>>
>>>>>>>                     Connecting to DB ... done.
>>>>>>>                     [doi=10.5072/UNINA.FEDOA/1125] Metadata
>>>>>>>                     registration response from datacite api:
>>>>>>>                     response_code=400
>>>>>>>                     [doi=10.5072/UNINA.FEDOA/1125] rescheduling
>>>>>>>                     event
>>>>>>>                     Error HTTP_LOCKED while trying to coin doi
>>>>>>>                     for eprint 1125
>>>>>>>                     Ending EPrints Repository.
>>>>>>>
>>>>>>>                     Thanks,
>>>>>>>                     Alfredo
>>>>>>>
>>>>>>>                     2017-06-16 17:09 GMT+02:00 Enio Carboni
>>>>>>>                     <enio.carboni at gmail.com
>>>>>>>                     <mailto:enio.carboni at gmail.com>>:
>>>>>>>
>>>>>>>                         I use my own version last year forked
>>>>>>>                         from eprints/datasite but with the news
>>>>>>>                         of the fork in eprintsug
>>>>>>>
>>>>>>>                         You may try at
>>>>>>>                         https://github.com/eniocarboni/datacite
>>>>>>>                         <https://github.com/eniocarboni/datacite>
>>>>>>>                         where i also add a manual script to coin
>>>>>>>                         in bin/datacitecoin so we can test better.
>>>>>>>
>>>>>>>                         As I wrote the last edit is November
>>>>>>>                         2016 so I hope the plugin can still be fine
>>>>>>>
>>>>>>>                           Enio Carboni
>>>>>>>
>>>>>>>
>>>>>>>                         Il 16/06/2017 16:36, Alfredo Cosco ha
>>>>>>>                         scritto:
>>>>>>>>                         Hello,
>>>>>>>>                         no, I didn't receive any suggestion.
>>>>>>>>                         But now at least I can read an error log.
>>>>>>>>                         So, I verified my plugin and is in sync
>>>>>>>>                         with github repo.
>>>>>>>>
>>>>>>>>                         I verified all connection parameters
>>>>>>>>                         and set up the script to make tests on
>>>>>>>>                         datacite: 
>>>>>>>>                         $c->{datacitedoi}{prefix} = "10.5072";
>>>>>>>>                         $c->{datacitedoi}{apiurl} =
>>>>>>>>                         "https://mds.test.datacite.org";;
>>>>>>>>
>>>>>>>>                         then I restarted the indexer.
>>>>>>>>
>>>>>>>>                         Now when I try to coin a DOI the
>>>>>>>>                         indexer.log add this message
>>>>>>>>
>>>>>>>>                         [urn:uuid:86176f74-3e5f-466c-8680-94b13876b8ff]
>>>>>>>>                         Event::DataCiteEvent::datacite_doi:
>>>>>>>>                         Error during execution:
>>>>>>>>                         XML::LibXML::Node::appendChild() --
>>>>>>>>                         nNode is not a blessed SV reference at
>>>>>>>>                         /usr/share/eprints3/archives/sire/cfg/plugins/EPrints/Plugin/Export/DataCiteXML.pm
>>>>>>>>                         line 73. 
>>>>>>>>
>>>>>>>>                         Thanks
>>>>>>>>                         Alfedo
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>                         2017-06-13 22:43 GMT+02:00 Tomasz
>>>>>>>>                         Neugebauer
>>>>>>>>                         <Tomasz.Neugebauer at concordia.ca
>>>>>>>>                         <mailto:Tomasz.Neugebauer at concordia.ca>>:
>>>>>>>>
>>>>>>>>                             I hope that Alfredo received some
>>>>>>>>                             help from back in April, I didn?t
>>>>>>>>                             see it on the list. 
>>>>>>>>
>>>>>>>>                             I found installing the DataCite
>>>>>>>>                             plugin difficult as well. I got it
>>>>>>>>                             work eventually, but it was not
>>>>>>>>                             trivial.
>>>>>>>>
>>>>>>>>                             I think that the Bazaar plugin is
>>>>>>>>                             probably out of synch with all the
>>>>>>>>                             fixes that were applied in the last
>>>>>>>>                             year or so to the github code.
>>>>>>>>
>>>>>>>>                             Here is a couple of points to
>>>>>>>>                             remember when troubleshooting
>>>>>>>>                             DataCite plugin (something I was
>>>>>>>>                             doing today):
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             1)      The indexer does much of
>>>>>>>>                             the work, so if you make a change
>>>>>>>>                             to the DataCite Event script, you
>>>>>>>>                             have to restart the indexer before
>>>>>>>>                             you see a change.  Today, I had to
>>>>>>>>                             make a change to accommodate this
>>>>>>>>                             issue:
>>>>>>>>                             https://github.com/eprintsug/DataCiteDoi/issues/13
>>>>>>>>                             <https://github.com/eprintsug/DataCiteDoi/issues/13>
>>>>>>>>                             for example, since I was minting a
>>>>>>>>                             DOI for an item with a title in French.
>>>>>>>>
>>>>>>>>                             2)      The error/logging for
>>>>>>>>                             minting seems mostly to be stored
>>>>>>>>                             with the indexer.log in var folder.
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             Thanks to David for flagging issue
>>>>>>>>                             13!  I spent half the day trying to
>>>>>>>>                             figure this one out before I found
>>>>>>>>                             the issue post.  
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             Tomasz
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             *From:*eprints-tech-bounces at ecs.soton.ac.uk
>>>>>>>>                             <mailto:eprints-tech-bounces at ecs.soton.ac.uk>
>>>>>>>>                             [mailto:eprints-tech-bounces at ecs.soton.ac.uk
>>>>>>>>                             <mailto:eprints-tech-bounces at ecs.soton.ac.uk>]
>>>>>>>>                             *On Behalf Of *Alfredo Cosco
>>>>>>>>                             *Sent:* April-10-17 3:33 AM
>>>>>>>>                             *To:* eprints-tech at ecs.soton.ac.uk
>>>>>>>>                             <mailto:eprints-tech at ecs.soton.ac.uk>
>>>>>>>>                             *Subject:* [EP-tech] DataCite Doi
>>>>>>>>                             Plugin
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             Hi all,
>>>>>>>>
>>>>>>>>                             i'm trying to configure DataCite
>>>>>>>>                             Doi plugin found on eprintsug
>>>>>>>>                             github page:
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             https://github.com/eprintsug/DataCiteDoi
>>>>>>>>                             <https://github.com/eprintsug/DataCiteDoi>
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             The plugin seems
>>>>>>>>                             correctly installed, the button to
>>>>>>>>                             coin a DOI appears but seems that
>>>>>>>>                             it doesn't work.
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             I  set the plugin with the test API
>>>>>>>>                             address:
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             https://mds.test.datacite.org
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             I set it with my datacite user and pw. 
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             But new DOIs do not appear in the
>>>>>>>>                             list of generated DOI.
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             Please help me.
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                             Thanks,
>>>>>>>>
>>>>>>>>                             Alfredo
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>                              
>>>>>>>>
>>>>>>>>
>>>>>>>>                             *** Options:
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>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
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>>>>>>>
>>>>>>>
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>>>>>>>
>>>>>>>
>>>>>>>
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>>>>>>
>>>>>>
>>>>>>                     *** Options:
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>>>>>>
>>>>>>
>>>>>>
>>>>>>
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>>>>>
>>>>>
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>>>>
>>>>
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>>>>
>>>>
>>>>
>>>>
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>>>
>>>
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>>
>>
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>
>
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