EPrints Technical Mailing List Archive

Message: #09535


< Previous (by date) | Next (by date) > | < Previous (in thread) | Next (in thread) > | Messages - Most Recent First | Threads - Most Recent First

Re: [EP-tech] error in script


CAUTION: This e-mail originated outside the University of Southampton.
Good day!

root@eprints-00:~# xmllint /opt/eprints3/lib/citations/user/default.xml
warning: failed to load external entity "/opt/eprints3/lib/citations/user/default.xml"
root@eprints-00:~# xmllint /opt/eprints3/archives/aea/cfg/citations/user/default.xml
warning: failed to load external entity "/opt/eprints3/archives/aea/cfg/citations/user/default.xml"
root@eprints-00:~# su eprints
eprints@eprints-00:/root$ cd
eprints@eprints-00:~$ xmllint /opt/eprints3/archives/aea/cfg/citations/user/default.xml
warning: failed to load external entity "/opt/eprints3/archives/aea/cfg/citations/user/default.xml"
eprints@eprints-00:~$

i only got this result


On Wed, Jan 17, 2024 at 4:09 PM David R Newman <drn@ecs.soton.ac.uk> wrote:
Hi Zen,

I was just using "citations/user/default.xml" as a shorthand, as I don't know exactly where the default user citation file that your EPrints will actually be using is, as you can have multiple versions and only the highest priority one is actually used by EPrints.  You need to find that first that and then run xmllint against it.  Substituting EPRINTS_PATH for the path of your EPrints installations, if the file is only under EPrints' lib directory the command would be:

xmllint EPRINTS_PATH/lib/citations/user/default.xml

If you have a copy under your archive, (also substituting ARCHIVE_ID for the ID of your archive), that would be:

xmllint EPRINTS_PATH/archives/ARCHIVE_ID/cfg/citations/user/default.xml

Regards

David Newman

On 17/01/2024 6:53 am, zen zenitram wrote:
CAUTION: This e-mail originated outside the University of Southampton.
CAUTION: This e-mail originated outside the University of Southampton.
Good day!

Where should i run this command?  xmllint citations/user/default.xml 

i only get this "warning: failed to load external entity "citations/user/default.xml"

Thank you!

On Tue, Jan 16, 2024 at 4:48 PM David R Newman <drn@ecs.soton.ac.uk> wrote:
Hi Zen,

The value for the depositing user is generated from the default user citation, therefore it is likely there is something wrong with this citation file.  This can be found under EPRINTS_PATH/lib/citations/user/default.xml or may have been copied to your archive configuration under EPRINTS_PATH/archives/ARCHIVE_ID/cfg/citations/user/default.xml.  The main test to see if there is an issue with this file is to use the xmlint command [1] against it, e.g.

xmllint citations/user/default.xml

If this show any errors then go in and fix the XML in this file.  After you have done this you will need to regenerate the abstract page to fix the [error in script], as this page is cached.  This can be done with the command:

EPRINTS_PATH/bin/generate_abstracts ARCHIVE_ID EPRINT_ID

Also, this command should provide some information about the error if the issue was not in the user's default citation file.  If it does show and error, reply to this email with this error message and I will see if I can further advise.  If fixing the citation file did resolve your issue, you will probably need to fix all abstract pages. You can either run the command above without an EPRINT_ID, which may take some time, or you can reload your webserver (e.g. apachectl graceful) and run the refresh abstracts command:

EPRINTS_PATH/bin/epadmin refresh_abstracts ARCHIVE_ID

This will ensure all abstract pages are regenerated on next request rather than using the existing cache.

Regards

David Newman

[1] If not already installed use "yum install libxml2" or "apt install libxml2-utils"

On 16/01/2024 4:02 am, zen zenitram wrote:
CAUTION: This e-mail originated outside the University of Southampton.
CAUTION: This e-mail originated outside the University of Southampton.
Good day!

I have a problem in some of the documents in my eprints repository

 

Item Type:           Thesis (Masters)

Additional Information: MT LANG & LIT 5 1989

Subjects:              P Language and Literature > P Philology. Linguistics

P Language and Literature > PN Literature (General)

Users:   College of Liberal Arts and Communication > CLA Graduate Studies

Depositing User:               [error in script]

Date Deposited: 05 Jul 2016 03:54

Last Modified:   05 Jul 2016 03:54

URI:       http://thesis.dlsud.edu.ph/id/eprint/4190

Actions (login required)


It did not show Depositing user ( error in script)


when i tried to click view item, it give Internal server error 500

Internal Server Error

The server encountered an internal error or misconfiguration and was unable to complete your request.

Please contact the server administrator at aklatan@dlsud.edu.ph to inform them of the time this error occurred, and the actions you performed just before this error.

More information about this error may be available in the server error log.


Apache/2.4.52 (Ubuntu) Server at thesis.dlsud.edu.ph Port 80

How can i delete is kind of file so that we can re encode it to our repository.

or how can i check the error. 

Thank you!

*** Options: https://wiki.eprints.org/w/Eprints-tech_Mailing_List
*** Archive: https://www.eprints.org/tech.php/
*** EPrints community wiki: https://wiki.eprints.org/


*** Options: https://wiki.eprints.org/w/Eprints-tech_Mailing_List
*** Archive: https://www.eprints.org/tech.php/
*** EPrints community wiki: https://wiki.eprints.org/


*** Options: https://wiki.eprints.org/w/Eprints-tech_Mailing_List
*** Archive: https://www.eprints.org/tech.php/
*** EPrints community wiki: https://wiki.eprints.org/


*** Options: https://wiki.eprints.org/w/Eprints-tech_Mailing_List
*** Archive: https://www.eprints.org/tech.php/
*** EPrints community wiki: https://wiki.eprints.org/